PyRBP
latest
Getting Started
Getting Started
Installation
API
PyRBP.filesOperation
PyRBP.Features
PyRBP.featureSelection
PyRBP.evaluateClassifiers
PyRBP.metricsPlot
EXAMPLES
PyRBP basic usage flow
File operation examples
Feature generation examples
Feature selection examples
Evaluating classifiers examples
Performance and data visualization examples
HISTORY
Release History
PyRBP
Index
Edit on GitHub
Index
B
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G
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P
B
built-in function
PyRBP.evaluateClassifiers.evaluateDLclassifers()
PyRBP.evaluateClassifiers.evaluateMLclassifers()
PyRBP.Features.generateDynamicLMFeatures()
PyRBP.Features.generateStaticLMFeatures()
PyRBP.Features.generateStructureFeatures()
PyRBP.featureSelection.cfs()
PyRBP.featureSelection.chiSquare()
PyRBP.featureSelection.cife()
PyRBP.featureSelection.cmim()
PyRBP.featureSelection.disr()
PyRBP.featureSelection.fisherScore()
PyRBP.featureSelection.fScore()
PyRBP.featureSelection.giniIndex()
PyRBP.featureSelection.icap()
PyRBP.featureSelection.jmi()
PyRBP.featureSelection.llL21()
PyRBP.featureSelection.lsL21()
PyRBP.featureSelection.mifs()
PyRBP.featureSelection.mim()
PyRBP.featureSelection.mrmr()
PyRBP.featureSelection.relief_f()
PyRBP.featureSelection.traceRatio()
PyRBP.featureSelection.tScore()
PyRBP.fileOperation.read_label()
PyRBP.filesOperation.read_fasta_file()
PyRBP.metricsPlot.barplot()
PyRBP.metricsPlot.boxplot()
PyRBP.metricsPlot.confusion_matirx_deeplearning()
PyRBP.metricsPlot.confusion_matrix_machinelearning()
PyRBP.metricsPlot.cross_validation_score()
PyRBP.metricsPlot.descrimination_threshold()
PyRBP.metricsPlot.det_curve_deeplearning()
PyRBP.metricsPlot.det_curve_machinelearning()
PyRBP.metricsPlot.learning_curve()
PyRBP.metricsPlot.partial_dependence()
PyRBP.metricsPlot.pointplot()
PyRBP.metricsPlot.precision_recall_curve_deeplearning()
PyRBP.metricsPlot.precision_recall_curve_machinelearning()
PyRBP.metricsPlot.prediction_error()
PyRBP.metricsPlot.roc_curve_deeplearning()
PyRBP.metricsPlot.roc_curve_machinelearning()
PyRBP.metricsPlot.shap_bar()
PyRBP.metricsPlot.shap_beeswarm()
PyRBP.metricsPlot.shap_heatmap()
PyRBP.metricsPlot.shap_interaction_scatter()
PyRBP.metricsPlot.shap_scatter()
PyRBP.metricsPlot.shap_waterfall()
PyRBP.metricsPlot.sns_heatmap()
PyRBP.metricsPlot.violinplot()
G
generateBPFeatures() (PyRBP.Features method)
P
PyRBP.evaluateClassifiers.evaluateDLclassifers()
built-in function
PyRBP.evaluateClassifiers.evaluateMLclassifers()
built-in function
PyRBP.Features.generateDynamicLMFeatures()
built-in function
PyRBP.Features.generateStaticLMFeatures()
built-in function
PyRBP.Features.generateStructureFeatures()
built-in function
PyRBP.featureSelection.cfs()
built-in function
PyRBP.featureSelection.chiSquare()
built-in function
PyRBP.featureSelection.cife()
built-in function
PyRBP.featureSelection.cmim()
built-in function
PyRBP.featureSelection.disr()
built-in function
PyRBP.featureSelection.fisherScore()
built-in function
PyRBP.featureSelection.fScore()
built-in function
PyRBP.featureSelection.giniIndex()
built-in function
PyRBP.featureSelection.icap()
built-in function
PyRBP.featureSelection.jmi()
built-in function
PyRBP.featureSelection.llL21()
built-in function
PyRBP.featureSelection.lsL21()
built-in function
PyRBP.featureSelection.mifs()
built-in function
PyRBP.featureSelection.mim()
built-in function
PyRBP.featureSelection.mrmr()
built-in function
PyRBP.featureSelection.relief_f()
built-in function
PyRBP.featureSelection.traceRatio()
built-in function
PyRBP.featureSelection.tScore()
built-in function
PyRBP.fileOperation.read_label()
built-in function
PyRBP.filesOperation.read_fasta_file()
built-in function
PyRBP.metricsPlot.barplot()
built-in function
PyRBP.metricsPlot.boxplot()
built-in function
PyRBP.metricsPlot.confusion_matirx_deeplearning()
built-in function
PyRBP.metricsPlot.confusion_matrix_machinelearning()
built-in function
PyRBP.metricsPlot.cross_validation_score()
built-in function
PyRBP.metricsPlot.descrimination_threshold()
built-in function
PyRBP.metricsPlot.det_curve_deeplearning()
built-in function
PyRBP.metricsPlot.det_curve_machinelearning()
built-in function
PyRBP.metricsPlot.learning_curve()
built-in function
PyRBP.metricsPlot.partial_dependence()
built-in function
PyRBP.metricsPlot.pointplot()
built-in function
PyRBP.metricsPlot.precision_recall_curve_deeplearning()
built-in function
PyRBP.metricsPlot.precision_recall_curve_machinelearning()
built-in function
PyRBP.metricsPlot.prediction_error()
built-in function
PyRBP.metricsPlot.roc_curve_deeplearning()
built-in function
PyRBP.metricsPlot.roc_curve_machinelearning()
built-in function
PyRBP.metricsPlot.shap_bar()
built-in function
PyRBP.metricsPlot.shap_beeswarm()
built-in function
PyRBP.metricsPlot.shap_heatmap()
built-in function
PyRBP.metricsPlot.shap_interaction_scatter()
built-in function
PyRBP.metricsPlot.shap_scatter()
built-in function
PyRBP.metricsPlot.shap_waterfall()
built-in function
PyRBP.metricsPlot.sns_heatmap()
built-in function
PyRBP.metricsPlot.violinplot()
built-in function